TY - JOUR
T1 - Linear Channel Modeling and Error Analysis for Intra/Inter-Cellular Ca2+ Molecular Communication
AU - Bicen, A. Ozan
AU - Akyildiz, Ian F.
AU - Balasubramaniam, Sasitharan
AU - Koucheryavy, Yevgeni
N1 - Funding Information:
The works of A. O. Bicen and I. F. Akyildiz were supported in part by the U.S. National Science Foundation (NSF) under the Grant CNS-1110947 and in part by the FiDiPro program of Academy of Finland "Nanocommunication Networks," 2012-2016. The work of S. Balasubramaniam was supported by the Academy of Finland FiDiPro program for the project "Nanocommunications Networks" 2012-2016, Finnish Academy Research Fellow program under Project no. 284531, and the Science Foundation Ireland via the Connect research centre under Grant 13/RC/2077. The work of Y. Koucheryavy was supported by the FiDiPro program of Academy of Finland "Nanocommunication Networks," 2012-2016.
Publisher Copyright:
© 2016 IEEE.
PY - 2016/7
Y1 - 2016/7
N2 - The use of intra/inter-cellular calcium ion (Ca2+) signaling for molecular communication (MC) is investigated in this paper. In particular, the elevation of the intracellular Ca2+ concentration upon the external excitation, i.e., Ca2+ wave generation, and the intercellular propagation of Ca2+ wave over consecutive cells are studied for information transmission. The main objective of this paper is to develop a linear channel model for intra/inter-cellular Ca2+ MC. In this context, the end-to-end Ca2+ MC system is studied under three blocks: the wave generation, the gap junctional (intercellular) propagation, and the intracellular propagation. The wave generation block captures the intracellular Ca2+ signaling pathway including the release of Ca2+ from the organelles and the buffers inside a cell, and the intake from the extracellular space. The gap junctional (intercellular) propagation block captures the Ca2+ transition through the gap junctions between the touching cells. The intracellular propagation block defines the effect of the cytoplasmic diffusion. Using the developed blocks for the different biophysical phenomena, the end-to-end channel gain and delay formulas are derived. Furthermore, the bit error probability is studied to reveal the impact of the detection threshold. This work provides the basis for the modeling, analysis and the design of Ca2+ MC systems.
AB - The use of intra/inter-cellular calcium ion (Ca2+) signaling for molecular communication (MC) is investigated in this paper. In particular, the elevation of the intracellular Ca2+ concentration upon the external excitation, i.e., Ca2+ wave generation, and the intercellular propagation of Ca2+ wave over consecutive cells are studied for information transmission. The main objective of this paper is to develop a linear channel model for intra/inter-cellular Ca2+ MC. In this context, the end-to-end Ca2+ MC system is studied under three blocks: the wave generation, the gap junctional (intercellular) propagation, and the intracellular propagation. The wave generation block captures the intracellular Ca2+ signaling pathway including the release of Ca2+ from the organelles and the buffers inside a cell, and the intake from the extracellular space. The gap junctional (intercellular) propagation block captures the Ca2+ transition through the gap junctions between the touching cells. The intracellular propagation block defines the effect of the cytoplasmic diffusion. Using the developed blocks for the different biophysical phenomena, the end-to-end channel gain and delay formulas are derived. Furthermore, the bit error probability is studied to reveal the impact of the detection threshold. This work provides the basis for the modeling, analysis and the design of Ca2+ MC systems.
KW - Bit error probability
KW - channel modeling
KW - intercellular Ca waves
KW - intracellular Ca signaling
KW - molecular communication
UR - http://www.scopus.com/inward/record.url?scp=84991512296&partnerID=8YFLogxK
U2 - 10.1109/TNB.2016.2574639
DO - 10.1109/TNB.2016.2574639
M3 - Article
C2 - 27514062
AN - SCOPUS:84991512296
VL - 15
SP - 488
EP - 498
JO - IEEE Transactions on Nanobioscience
JF - IEEE Transactions on Nanobioscience
SN - 1536-1241
IS - 5
M1 - 7533443
ER -