TY - JOUR
T1 - Rapid discrimination of Candida species based on optical diffraction pattern
AU - Abedini, Mitra
AU - Montazeri, Hojatollah
AU - Lotfali, Ensieh
AU - Ghasemi, Reza
AU - Badieyan, Saeedesadat
AU - Sasanpour, Pezhman
N1 - Funding Information:
This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.
Publisher Copyright:
© 2022
PY - 2023/3/1
Y1 - 2023/3/1
N2 - Candidiasis occurs mainly in immunocompromised patients. Rapid detection of Candida species can play a major role in the successful management of fungal infections and treatment monitoring. Detection and discrimination of five common strains of Candida species was performed using the optical elastic scattering diffraction pattern of their colonies. Using laser light with 632 nm wavelength and the designed optical system, optical diffraction patterns of C. albicans (ATCC12261), C. tropicalis (ATCC20336), C. glabrata (15545), C. guilliermondii (20216), and C. parapsilosis (22019) were recorded, processed and analyzed. The results of our study show that based on the different structure of Candida species and dissimilar structure of their colonies, the difference between acquired diffraction patterns are recognizable. In addition, through extraction of statistical feature of the diffraction pattern images and using classification techniques, the detection and discrimination could be performed in a semi-automatic way. The analysis of the colonies of five different Candida species by the optical diffraction patterns generated from the interaction of the laser with colonies' structures demonstrated that the technique had the potential to be applied for the detection and discrimination of various species.
AB - Candidiasis occurs mainly in immunocompromised patients. Rapid detection of Candida species can play a major role in the successful management of fungal infections and treatment monitoring. Detection and discrimination of five common strains of Candida species was performed using the optical elastic scattering diffraction pattern of their colonies. Using laser light with 632 nm wavelength and the designed optical system, optical diffraction patterns of C. albicans (ATCC12261), C. tropicalis (ATCC20336), C. glabrata (15545), C. guilliermondii (20216), and C. parapsilosis (22019) were recorded, processed and analyzed. The results of our study show that based on the different structure of Candida species and dissimilar structure of their colonies, the difference between acquired diffraction patterns are recognizable. In addition, through extraction of statistical feature of the diffraction pattern images and using classification techniques, the detection and discrimination could be performed in a semi-automatic way. The analysis of the colonies of five different Candida species by the optical diffraction patterns generated from the interaction of the laser with colonies' structures demonstrated that the technique had the potential to be applied for the detection and discrimination of various species.
KW - Candida species
KW - Elastic light scattering
KW - Image processing
KW - K-nearest neighbors (k−NN) algorithm
KW - Optical diffraction pattern
UR - http://www.scopus.com/inward/record.url?scp=85147316027&partnerID=8YFLogxK
U2 - 10.1016/j.jphotobiol.2022.112630
DO - 10.1016/j.jphotobiol.2022.112630
M3 - Article
AN - SCOPUS:85147316027
SN - 1011-1344
VL - 240
JO - Journal of Photochemistry and Photobiology B: Biology
JF - Journal of Photochemistry and Photobiology B: Biology
M1 - 112630
ER -